PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95907.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 283aa MW: 31574.3 Da PI: 7.6212 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.5 | 4.2e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ll+ ++k +G g W + +++ g++R++k+c++rw++yl RWR95907.1 15 KGAWTALEDKLLISYIKTHGVGKWGSLPKKAGLKRCGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.6e-17 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E+el+++++++lG++ W++Ia +++ gRt++++k++w++ RWR95907.1 68 RGNITQDEEELIIRLHNLLGNK-WSLIAGRIP-GRTDNEIKNYWNTT 112 7999******************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MDRRRSSCSE DGLKKGAWTA LEDKLLISYI KTHGVGKWGS LPKKAGLKRC GKSCRLRWLN 60 YLRPDIKRGN ITQDEEELII RLHNLLGNKW SLIAGRIPGR TDNEIKNYWN TTLAKKLKAG 120 PPKSSIGNGP ICQFEEKNIV IGPAPPQKVQ ANVIRTKALR CTRPTVLPLH MFSSLDCNND 180 QAMDIQTHMD PQIIDGALKF SNDFMMGFNK EEGGEAEQVY MGCPPNTSFC PEIQVENGMT 240 GASILFEEAM VIDNLVMNGC DLQNIGSAVG SWSCFLDAEE EWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 1e-58 | MYB family protein |