PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95742.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 754aa MW: 81131.5 Da PI: 6.0665

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.3	1.4e-32	336	392	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgsefprsYY+Ct+++C+vkkkvers+ +++++ei+Y+g+Hnh+k RWR95742.1 336 DGYNWRKYGQKQVKGSEFPRSYYKCTHSNCQVKKKVERSH-EGQITEIIYKGTHNHPK 392 9*************************************.*************85 PP
2	WRKY	102.7	2e-32	548	606	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+ RWR95742.1 548 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 606 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence
MAGTDHNVDV IGDWAPSNPS PRTFFSTLLA DGVGSRSFSN LPPEENGSKG VLHGSEKQSA 60 AADLSNEDEA GDEDSLNLMS GFNLFSGQKS SSRGGLAERM AARAGFNAPK LNTARIRSAN 120 LVSPASPEGH SLFLTIPPGL SPTTLLDSPV FLSNALAQHS PTTGKFPLTQ CNNRSSFFVP 180 EAPDKNKDED ADTASFVFKP HMELNSSYLP SAANKTMEVN EAPTKLPPTD NALDPYSILL 240 FQGTSTSHQR QIFLPNINVS VQPSHCIEAT KTHSQNQQEF SEAIAGKDVF GNITSEARVS 300 NDVGNADLSS RFDDQDDGGD QRGENPSLAA NGLSGDGYNW RKYGQKQVKG SEFPRSYYKC 360 THSNCQVKKK VERSHEGQIT EIIYKGTHNH PKPPPNRRLV VGSSNSITNM DIAEQPSAQG 420 GFSGESAWAD TQQGAATAGP DWRHDGMETA SSASAATELD PSASMPTMNS SRFEPAEPID 480 ISSTLSNDDD DDDQATHNSI SLGCDEDGDE SESKRRKIDT SVMEVSGATR AIREPRVVVQ 540 TTSEVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTNAGCT VRKHVERASH DLKSVITTYE 600 GKHNHDVPAA RNSSHANSGT SSAAPPPPAA SIPRPEPSSQ LHHSMARFDG SSLGKLASAG 660 RPPLGPMSNY TAFGMNHINL ANLAMAGLGP GQVRLPLNMP MNHYLGQHKV NETGFMMPKG 720 EPKEEPMSES GHPVSTAAIY NQMMMSRLPL GPQL

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence

MAGTDHNVDV IGDWAPSNPS PRTFFSTLLA DGVGSRSFSN LPPEENGSKG VLHGSEKQSA  60
AADLSNEDEA GDEDSLNLMS GFNLFSGQKS SSRGGLAERM AARAGFNAPK LNTARIRSAN  120
LVSPASPEGH SLFLTIPPGL SPTTLLDSPV FLSNALAQHS PTTGKFPLTQ CNNRSSFFVP  180
EAPDKNKDED ADTASFVFKP HMELNSSYLP SAANKTMEVN EAPTKLPPTD NALDPYSILL  240
FQGTSTSHQR QIFLPNINVS VQPSHCIEAT KTHSQNQQEF SEAIAGKDVF GNITSEARVS  300
NDVGNADLSS RFDDQDDGGD QRGENPSLAA NGLSGDGYNW RKYGQKQVKG SEFPRSYYKC  360
THSNCQVKKK VERSHEGQIT EIIYKGTHNH PKPPPNRRLV VGSSNSITNM DIAEQPSAQG  420
GFSGESAWAD TQQGAATAGP DWRHDGMETA SSASAATELD PSASMPTMNS SRFEPAEPID  480
ISSTLSNDDD DDDQATHNSI SLGCDEDGDE SESKRRKIDT SVMEVSGATR AIREPRVVVQ  540
TTSEVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTNAGCT VRKHVERASH DLKSVITTYE  600
GKHNHDVPAA RNSSHANSGT SSAAPPPPAA SIPRPEPSSQ LHHSMARFDG SSLGKLASAG  660
RPPLGPMSNY TAFGMNHINL ANLAMAGLGP GQVRLPLNMP MNHYLGQHKV NETGFMMPKG  720
EPKEEPMSES GHPVSTAAIY NQMMMSRLPL GPQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-148	WRKY family protein