PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YC | ||||||||
Protein Properties | Length: 142aa MW: 15950.5 Da PI: 9.9574 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 43.9 | 5.1e-14 | 13 | 93 | 19 | 98 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivpr 98 ++Pl r++ki+k d+++ ++ +ea l+s + +lf+ lt +s a ++kr+t+k i a +r + dfl+d p RWR95627.1 13 SAFPLGRVRKIVKLDKEIIRVNSEALFLISLSTDLFLHFLTEKSMQVALDKKRKTIKTDHIRIAAKRHpPTADFLLDSLPM 93 579**********************************************************98887752799*****9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MEEGKEEEPI LCSAFPLGRV RKIVKLDKEI IRVNSEALFL ISLSTDLFLH FLTEKSMQVA 60 LDKKRKTIKT DHIRIAAKRH PPTADFLLDS LPMPSQPPVR PSSDQTKPSS SHGDEKPLPP 120 GVRRIEQFFH KSAGYGSQIA HA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 7e-43 | NF-YC family protein |