PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95526.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 472aa MW: 52252 Da PI: 9.298

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.8	9.4e-33	196	251	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vkgse+prsYY+Ct ++Cpvkkkvers d+++ ei+Y+geHnh+ RWR95526.1 196 DGYNWRKYGQKQVKGSEYPRSYYKCTNPNCPVKKKVERSL-DGQLAEIVYKGEHNHP 251 9*************************************.*************8 PP
2	WRKY	104	8.4e-33	390	447	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCt +C+v+k+ver+++dp+++++tYeg+Hnh+ RWR95526.1 390 ADGFRWRKYGQKVVKGNQYPRSYYRCTNLKCNVRKHVERTSDDPRAFITTYEGKHNHD 447 7********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEVQDAEKIV LAKPVASRPS RPHFKSFSEL LAGAINASPP RTCSETTLPI RPKTVRFRPS 60 VNRASVGAVS SQGEISGTPV CYSSDKISES DRESTVIYKP LAKLVSRATA SVLANLGNFD 120 TSQQNAQQSQ VQTQVQVPDQ RKYHPQAHMT SNLQQNLRLQ TETNQIPDPS KLASQNQDQY 180 QRSLLAVSSV DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC TNPNCPVKKK VERSLDGQLA 240 EIVYKGEHNH PRPLPSKRHS SGISADGTER ASDNQLWTNP INERNEGTDG RIESQNEVGL 300 SASSSYLGKV ILPQDPVIAT PFNTVGTPDN SCGISGDCEE GSRQVGGNDD EPNSKRRKIA 360 DQANEIGPVL QGVQESHILV QNSTESEILA DGFRWRKYGQ KVVKGNQYPR SYYRCTNLKC 420 NVRKHVERTS DDPRAFITTY EGKHNHDMPV SKSPKPVASD TDSIPPSSKS KP

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEVQDAEKIV LAKPVASRPS RPHFKSFSEL LAGAINASPP RTCSETTLPI RPKTVRFRPS  60
VNRASVGAVS SQGEISGTPV CYSSDKISES DRESTVIYKP LAKLVSRATA SVLANLGNFD  120
TSQQNAQQSQ VQTQVQVPDQ RKYHPQAHMT SNLQQNLRLQ TETNQIPDPS KLASQNQDQY  180
QRSLLAVSSV DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC TNPNCPVKKK VERSLDGQLA  240
EIVYKGEHNH PRPLPSKRHS SGISADGTER ASDNQLWTNP INERNEGTDG RIESQNEVGL  300
SASSSYLGKV ILPQDPVIAT PFNTVGTPDN SCGISGDCEE GSRQVGGNDD EPNSKRRKIA  360
DQANEIGPVL QGVQESHILV QNSTESEILA DGFRWRKYGQ KVVKGNQYPR SYYRCTNLKC  420
NVRKHVERTS DDPRAFITTY EGKHNHDMPV SKSPKPVASD TDSIPPSSKS KP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-104	WRKY family protein