PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95454.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 653aa MW: 74661.9 Da PI: 7.0967

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.4e-08	597	642	4	47
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 W++ + l++a k ++++ +W+++a+ ++ g+t qc+ ++ ++ RWR95454.1 597 WSATQERALIQALKTFPKEtsqRWERVAAAVP-GKTVIQCRKKFMSL 642 ******************************.********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MDLLLISYSS EIVDGEPIYV ASNCLPVKAV NLEPAGHAFH AAVLKALGLN EEDDTDTDDK 60 STSDDKHCYK PSSESYTTKG KKKSSSDGKQ QDHYALLGLS HLRFLATEEQ IRKSYRETAL 120 KHHPDKQAAL LLAEETEAAK QAKKDEIENN FKSIQEAYEV LIDPVKRRIY DSTDEFDDEI 180 PTDCAPEDFF KVFGPAFMRN GRWSVGQPVP LLGEDNTPIS EVDSFYDFWY SFKTWRESPH 240 ADEFDLEQAE SRDHKRWMER QNVKLREKAR KEEYARVRAL VDNAYKRDPR IIRRKEEEKA 300 EKQRKKEAKF LARKQQEEEA ARVAEEERRR KEEEDKRAAE AALSQKKLKE KEKKLLRKER 360 TRLRVLSGPV VSKKLLNLSE SDVQTICMSL DMEQLRNLCD GAERKEGIER AQLLKDALGG 420 DNDNTNDKQD EKNLHQNGSL KPDRNDNGVT MTTPGNPLSI YEEKKERPWN RDEIELLRKG 480 MQKYPKGTSR RWEVISEYIG TGRSVEEILK ATKTVLLQKP DSAKAFDSFL EKRKPAPSID 540 SPLTSRTEVE GAPGASITNG APKAELKQSP KEGRDHQVLE CEPAQSGISS SAEQDIWSAT 600 QERALIQALK TFPKETSQRW ERVAAAVPGK TVIQCRKKFM SLKENFRNKK SAD

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MDLLLISYSS EIVDGEPIYV ASNCLPVKAV NLEPAGHAFH AAVLKALGLN EEDDTDTDDK  60
STSDDKHCYK PSSESYTTKG KKKSSSDGKQ QDHYALLGLS HLRFLATEEQ IRKSYRETAL  120
KHHPDKQAAL LLAEETEAAK QAKKDEIENN FKSIQEAYEV LIDPVKRRIY DSTDEFDDEI  180
PTDCAPEDFF KVFGPAFMRN GRWSVGQPVP LLGEDNTPIS EVDSFYDFWY SFKTWRESPH  240
ADEFDLEQAE SRDHKRWMER QNVKLREKAR KEEYARVRAL VDNAYKRDPR IIRRKEEEKA  300
EKQRKKEAKF LARKQQEEEA ARVAEEERRR KEEEDKRAAE AALSQKKLKE KEKKLLRKER  360
TRLRVLSGPV VSKKLLNLSE SDVQTICMSL DMEQLRNLCD GAERKEGIER AQLLKDALGG  420
DNDNTNDKQD EKNLHQNGSL KPDRNDNGVT MTTPGNPLSI YEEKKERPWN RDEIELLRKG  480
MQKYPKGTSR RWEVISEYIG TGRSVEEILK ATKTVLLQKP DSAKAFDSFL EKRKPAPSID  540
SPLTSRTEVE GAPGASITNG APKAELKQSP KEGRDHQVLE CEPAQSGISS SAEQDIWSAT  600
QERALIQALK TFPKETSQRW ERVAAAVPGK TVIQCRKKFM SLKENFRNKK SAD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	328	349	RRRKEEEDKRAAEAALSQKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	1e-108	MYB family protein