PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95086.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 705aa MW: 76621.5 Da PI: 6.308

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.1	6.6e-32	298	355	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g Hnh+k RWR95086.1 298 EDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCQVKKKVERSH-EGHITEIIYKGAHNHPK 355 7**************************************.*************85 PP
2	WRKY	103.2	1.4e-32	509	567	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+ RWR95086.1 509 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 567 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MAGISDCVLP PNFSPRTTLL SLLGEDVSSR SLQDLPGENE VDGPSKQKME LKSDDEEVGG 60 RASGECLWEL GGVFSGQKSN SRGGLAERMA ARAGFNAPRL NTARIRSSNI IPSSSPEVRS 120 PYLTIPPGLS PTSLLESPVF ISNSLAQLSP TTGKFPFAQC HNGSSMQISA SPDKDKDLLF 180 KDSDSESFVF KHHVEMSSSY FPSVANKVAS VTNHHQSFPR IEVSVQSVPY VPTQKQEIAE 240 VHTQNQREFI SPAGLTVNDN RGNITSDARP SQSSDDREEG EGDQRELPST AAAGALSEDG 300 YNWRKYGQKQ VKGSEYPRSY YKCTYPNCQV KKKVERSHEG HITEIIYKGA HNHPKPPPNR 360 RSVIGSSYPP GEMDGAEQSI AHVGFDGEPA WASSQHGVGT AGSNWRHDDM EMASAATEFY 420 DPSTNALVQD GPHFEMVDAI DESSTMSNNE DEDDQGTHGS VSLGHDDEGD ESESKRRKVD 480 ASLMEMTGAT RAIREPRVVV QTTSEVDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTNPGC 540 TVRKHVERAS HDLKSVITTY EGKHNHDVPA ARSSSHISNG PSGVTSTAAV QALIPRSEPS 600 KARDSLARFD GSSPLNTFGI PGRQSLQSNP SFSFGNNQPG LANLAMAGFG PGQGKLPILP 660 VHSQFGQRRI VDDVKEVPMS ESAPSFSNGS LYHQILSRLP LGHQL

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MAGISDCVLP PNFSPRTTLL SLLGEDVSSR SLQDLPGENE VDGPSKQKME LKSDDEEVGG  60
RASGECLWEL GGVFSGQKSN SRGGLAERMA ARAGFNAPRL NTARIRSSNI IPSSSPEVRS  120
PYLTIPPGLS PTSLLESPVF ISNSLAQLSP TTGKFPFAQC HNGSSMQISA SPDKDKDLLF  180
KDSDSESFVF KHHVEMSSSY FPSVANKVAS VTNHHQSFPR IEVSVQSVPY VPTQKQEIAE  240
VHTQNQREFI SPAGLTVNDN RGNITSDARP SQSSDDREEG EGDQRELPST AAAGALSEDG  300
YNWRKYGQKQ VKGSEYPRSY YKCTYPNCQV KKKVERSHEG HITEIIYKGA HNHPKPPPNR  360
RSVIGSSYPP GEMDGAEQSI AHVGFDGEPA WASSQHGVGT AGSNWRHDDM EMASAATEFY  420
DPSTNALVQD GPHFEMVDAI DESSTMSNNE DEDDQGTHGS VSLGHDDEGD ESESKRRKVD  480
ASLMEMTGAT RAIREPRVVV QTTSEVDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTNPGC  540
TVRKHVERAS HDLKSVITTY EGKHNHDVPA ARSSSHISNG PSGVTSTAAV QALIPRSEPS  600
KARDSLARFD GSSPLNTFGI PGRQSLQSNP SFSFGNNQPG LANLAMAGFG PGQGKLPILP  660
VHSQFGQRRI VDDVKEVPMS ESAPSFSNGS LYHQILSRLP LGHQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-157	WRKY family protein