PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 266aa MW: 30864.8 Da PI: 5.8497 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.5 | 4.7e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++lv +++++G ++W+t +++ g+ R++k+c+ rw++yl RWR95019.1 13 KGTWSAEEDQILVSYIRRFGYDNWRTLPKRAGLLRCGKSCRFRWLNYL 60 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+e++ ++kqlG++ W+ Ia++++ gRt++++k++w+++l RWR95019.1 66 RGNYSKEEEEIIDSLHKQLGNR-WSVIAARLP-GRTDNEIKNYWNTHL 111 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MVKACCVKVG LKKGTWSAEE DQILVSYIRR FGYDNWRTLP KRAGLLRCGK SCRFRWLNYL 60 RPDIKRGNYS KEEEEIIDSL HKQLGNRWSV IAARLPGRTD NEIKNYWNTH LKKRKKNQAM 120 TETRQTSIEN SSSSTNKEEF FQPIPAQMIL EYPENDLIFS QSSSSNFASD NGSMAKNIKQ 180 SNEVVVEQFM QSETAHELGT SINFQSLLAE LYTPEEYSLS SFEDPVLQFP LSPLSMGEYD 240 YLPLQYNTEM NILFNNYEEG EMPRTI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 116 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06180.1 | 5e-62 | MYB family protein |