PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94785.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 633aa MW: 70303.7 Da PI: 4.3114

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.2	4.9e-51	24	152	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdee+v++yLk+k+ g +l++ ++i+e+diy++ePwdLp +++k+++ ewyfFs+ dkk+ +g+r+nrat++gyWk+tgkd++v + + RWR94785.1 24 LAPGFRFHPTDEEIVSYYLKRKICGIPLRF-DAISEIDIYRFEPWDLPsrSRLKTRDLEWYFFSSLDKKHGNGSRTNRATEKGYWKTTGKDRPVRR-YS 120 579***********************99.99**********95337777888*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 ++vg+kktLvf+ grap+ge+++Wvmheyrle RWR94785.1 121 RTVGMKKTLVFHLGRAPHGERSNWVMHEYRLE 152 9***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MFSYSSSSPS SSSKPVAANK DALLAPGFRF HPTDEEIVSY YLKRKICGIP LRFDAISEID 60 IYRFEPWDLP SRSRLKTRDL EWYFFSSLDK KHGNGSRTNR ATEKGYWKTT GKDRPVRRYS 120 RTVGMKKTLV FHLGRAPHGE RSNWVMHEYR LEDPKLGQVG STQGTFVLCR IFQKSGPGPK 180 NGEQYGAPFI EEEWDDDVVI PKKENSGNDN IDIVSDVGEW GYVQMNDDEQ NLDMSIRYDN 240 AVPVLGFHGC DGDNNLKDHV GFPEGIDDKK ILNDPCEDDN FPELYVDEFF DDMGENTNLI 300 QEHADQYLCS VDENTNLTES DTMCPLAKDE KNEESNDVNA LGADFLTGET ADDGMMYFDA 360 PTHNQLPIED DLFIEIDDLL NRDDAADASG FEMLDELLTY FDATNDNLDR VPPVSSSNLS 420 ECVDFNTNPV VPASEVSAGT VQASVECPQT LKAPEVGQSS SSLQNPEAAG SRDNSRDDLA 480 ANDTVGSDVP YDATWDKSLA KHFTSMLESI TAPPAFAVDY ATGGSAKSVR HNSAQSTSVH 540 VNAGMFLVSQ LRVTDEGKHL LSQKTGDQFT SYGMGGDVMA TKHLNGYSCV LEVITETPAR 600 AISVIWQAGL YFGFFWVLVL GVSFKISNYI CTR

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MFSYSSSSPS SSSKPVAANK DALLAPGFRF HPTDEEIVSY YLKRKICGIP LRFDAISEID  60
IYRFEPWDLP SRSRLKTRDL EWYFFSSLDK KHGNGSRTNR ATEKGYWKTT GKDRPVRRYS  120
RTVGMKKTLV FHLGRAPHGE RSNWVMHEYR LEDPKLGQVG STQGTFVLCR IFQKSGPGPK  180
NGEQYGAPFI EEEWDDDVVI PKKENSGNDN IDIVSDVGEW GYVQMNDDEQ NLDMSIRYDN  240
AVPVLGFHGC DGDNNLKDHV GFPEGIDDKK ILNDPCEDDN FPELYVDEFF DDMGENTNLI  300
QEHADQYLCS VDENTNLTES DTMCPLAKDE KNEESNDVNA LGADFLTGET ADDGMMYFDA  360
PTHNQLPIED DLFIEIDDLL NRDDAADASG FEMLDELLTY FDATNDNLDR VPPVSSSNLS  420
ECVDFNTNPV VPASEVSAGT VQASVECPQT LKAPEVGQSS SSLQNPEAAG SRDNSRDDLA  480
ANDTVGSDVP YDATWDKSLA KHFTSMLESI TAPPAFAVDY ATGGSAKSVR HNSAQSTSVH  540
VNAGMFLVSQ LRVTDEGKHL LSQKTGDQFT SYGMGGDVMA TKHLNGYSCV LEVITETPAR  600
AISVIWQAGL YFGFFWVLVL GVSFKISNYI CTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	3e-93	NAC family protein