PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR94776.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HSF | ||||||||
Protein Properties | Length: 234aa MW: 27235.2 Da PI: 10.0137 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 108.7 | 4.2e-34 | 27 | 119 | 1 | 102 |
HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS HSF_DNA-bind 1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 +Fl k+++++ed+ ++++isw+++g++f+v+ + e+a+++Lp+ Fkhsnf+SFvRQLn+YgF+kv + + weF+h+ F++g+++ll++i RWR94776.1 27 SFLLKTHTLVEDPPTNDIISWNDQGTTFIVWRPVELARDLLPTLFKHSNFSSFVRQLNTYGFRKVASGR---------WEFHHNMFRRGERQLLCEI 114 59***************************************************************9988.........******************* PP XXXXX CS HSF_DNA-bind 98 krkks 102 +r+k RWR94776.1 115 QRRKA 119 **985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MNKEVCMKHA CVKSASSEHV KRATPPSFLL KTHTLVEDPP TNDIISWNDQ GTTFIVWRPV 60 ELARDLLPTL FKHSNFSSFV RQLNTYGFRK VASGRWEFHH NMFRRGERQL LCEIQRRKAW 120 DSKLPQSLVK TTMKESNDHQ RFSSSMSSSP SSYVSLSYEN KRLKRENGDL CVELASTKKK 180 CNELLNLVAF HLNSKKMVVE QRPKLFGVWL DLPQEKRREH EEFSENMSAL SSQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 2e-53 | HSF family protein |