PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94551.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 303aa    MW: 33589.6 Da    PI: 5.7057
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.37.5e-34150206258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 +Dgy+WrKYGqK vk+s++prsYYrCtsa C+vkk+vers++dp++v++tYeg+H+h
  RWR94551.1 150 EDGYRWRKYGQKAVKNSPYPRSYYRCTSAMCNVKKRVERSSDDPTIVVTTYEGKHTH 206
                 8******************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MEETKNSAGI TSFSDQVPTP FTSSGIFDLV SGDLAATGSI GFMELLGLEE LAPSIFDLLP  60
PLSLPPTSLP ESSDAGNPPA TPNSSSISSM STEAANEEQA REVVEEGEVE EEQEEQEKIK  120
KQSKPKKKNQ KKERQPRFAF MTKSEVDHLE DGYRWRKYGQ KAVKNSPYPR SYYRCTSAMC  180
NVKKRVERSS DDPTIVVTTY EGKHTHLSPV VHRSGSSVVP RDRFGFASAN AANFLPMQIT  240
QAHYQQQPYL LSLPPPSLNP CSAPSTASLL QYPPYYTPSA SLLRDHGLLQ DILPSDVRKE  300
EYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.13e-47WRKY family protein