PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR94526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 239aa MW: 27057.2 Da PI: 7.8753 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.2 | 3.9e-18 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +lv++++ +G g+W++ ar+ g++Rt+k+c++rw++yl RWR94526.1 22 RGPWTIEEDVILVNYIAIHGAGRWNLLARCAGLRRTGKSCRLRWLNYL 69 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.1 | 1.6e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWR94526.1 75 RGNITVEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDAHGRGCSL ITGRDEGKDM RRGPWTIEED VILVNYIAIH GAGRWNLLAR CAGLRRTGKS 60 CRLRWLNYLC PDVRRGNITV EEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV 120 KKQANHLKCD PNTKQFNDAM LHLWTRFRAA SASPSGSHHN PTTTHQNLTA GQACPAPPVH 180 SSIGATSDFH GNDTDCQVAH VSSLESWTSP SGWFDHEQNW GFDGDILGST WDMEEFGFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 3e-70 | MYB family protein |