PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94440.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GeBP

Protein Properties

Length: 412aa MW: 44728 Da PI: 4.526

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	114.7	5.7e-36	137	235	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqrlw++eDei lLqG++++++++g ++d+ fy+++k +++++++k+qlveK+rrLKkK+++ v+++ sgk++sf+++h+q +fe+s+kiW RWR94440.1 137 LFQRLWTDEDEIGLLQGFLEYTSQRGRgrgVFHHDTAPFYDQIKTRLQLDFNKNQLVEKLRRLKKKYRNVVNRIGSGKDFSFKSPHEQATFEISRKIWS 235 79********************9998755566**************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MRAAEDDPNL YGEEDEEDED EDTEEDEEDE DEEDDDVVVA ASASASAAAA AVPLPPDPLN 60 PQKRKAEDAV DDLNSPSPST TSSSSDQNPN KAPIPPPSSA PLSAPPDPTP PSSSAPAAAS 120 PDNKRLKTVP VDDSRRLFQR LWTDEDEIGL LQGFLEYTSQ RGRGRGVFHH DTAPFYDQIK 180 TRLQLDFNKN QLVEKLRRLK KKYRNVVNRI GSGKDFSFKS PHEQATFEIS RKIWSTAASA 240 PVDEDEDGNS HPNAGGGGGG NKVPRSRRRG RKRLDDVSGG HPHPPPQSAA AMEDNLPNFP 300 HSTPPSAAPA GAANPNVTNV IEDTVRSCLS PLFKELLYCA INGPCNSAVG GVTLNPLPLN 360 FGGNSVNLSS SEAVDERWRK QQILELEVYS KRLELVQEQI KSALEELRSM GS

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MRAAEDDPNL YGEEDEEDED EDTEEDEEDE DEEDDDVVVA ASASASAAAA AVPLPPDPLN  60
PQKRKAEDAV DDLNSPSPST TSSSSDQNPN KAPIPPPSSA PLSAPPDPTP PSSSAPAAAS  120
PDNKRLKTVP VDDSRRLFQR LWTDEDEIGL LQGFLEYTSQ RGRGRGVFHH DTAPFYDQIK  180
TRLQLDFNKN QLVEKLRRLK KKYRNVVNRI GSGKDFSFKS PHEQATFEIS RKIWSTAASA  240
PVDEDEDGNS HPNAGGGGGG NKVPRSRRRG RKRLDDVSGG HPHPPPQSAA AMEDNLPNFP  300
HSTPPSAAPA GAANPNVTNV IEDTVRSCLS PLFKELLYCA INGPCNSAVG GVTLNPLPLN  360
FGGNSVNLSS SEAVDERWRK QQILELEVYS KRLELVQEQI KSALEELRSM GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	5e-49	GeBP family protein