PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR93778.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HSF | ||||||||
Protein Properties | Length: 233aa MW: 26664.2 Da PI: 8.4888 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 104.4 | 9.5e-33 | 28 | 119 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k++ ++ed+ ++++isw+++g++fvv+ + efa+++Lp+ Fkhsnf+SFvRQLn+YgF+k + + weF+++ F++g++ ll++i+ RWR93778.1 28 FLLKTHMLVEDPGTDNIISWNDQGTAFVVWRPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKAASGR---------WEFHNDMFRRGETGLLCEIH 115 99*************************************************************99877.........******************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k RWR93778.1 116 RRKA 119 *985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MSQETSCMEH ECLKGPKDLF KRASPPPFLL KTHMLVEDPG TDNIISWNDQ GTAFVVWRPA 60 EFARDLLPTL FKHSNFSSFV RQLNTYGFRK AASGRWEFHN DMFRRGETGL LCEIHRRKAW 120 SSKLSTAPSK TQSPESDEDH GSSSTSSSSS YSILCDENKK LKRENGVLCM ELASTKKRCK 180 ELFDLVALYS NSESVVEDQR PKLFGVRLEL PQEKKRKDEF SDNIRNLLSQ SCK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 8e-61 | HSF family protein |