PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93506.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 316aa    MW: 35137.5 Da    PI: 7.5511
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.87.8e-081922321055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 rrRR+r+N++   L  l+P+      +K++ a+ Le+A +Y++ L+
  RWR93506.1 192 RRRRKRLNDRTRSLEGLMPWE-----RKMDTATLLEEAHKYVRFLE 232
                 9*******************9.....8***************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MERALSMSGR FFEIGSSSGR LTPQPIFPIE NLSKTLALLQ GSDYPLGSSL FGLPPDLLSL  60
PYLIEDPPPP SLQLIRPEQD PTPLRFESDK LKSPKLELGE EHNYIPTVHP DQSLLLLPSL  120
EYPPLVFYPI DGLDLFTVGS VQKRLRTLPY ADLEHPTLDQ SSSPSGTFLP LVEEVANAAP  180
AAHAYPRCTL ARRRRKRLND RTRSLEGLMP WERKMDTATL LEEAHKYVRF LEAQVSALQG  240
MPGLSGLPPT GPKPVRAGGF GGLERLNRQQ TLQVLVNSAR VQEKLYASGC CVFSFEQTMA  300
LKKMAEKKMK VSEFEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.14e-22bHLH family protein