PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93098.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TCP

Protein Properties

Length: 392aa MW: 42753.7 Da PI: 9.1254

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.8	1.1e-39	58	152	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......k 89 ++k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s++ + RWR93098.1 58 PPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSSMSAPlrssyfN 152 789******************************************************************99977777777777555445433330 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDGENGMRRP NFPLQLLERK EEDTCSSSGY PSLAITTVTT GLGSNSGLEI AELPKKPPPK 60 RASTKDRHTK VDGRGRRIRM PAACAARVFQ LTRELGHKSD GETIEWLLQQ AEPSVIAATG 120 TGTIPANFTS LNISLRSSGS SMSAPLRSSY FNHTLGAAPQ LRMASDWERG VDESTQRRIL 180 FPSIGLSSDQ NTSTLFNGNF HSNSAINQTL QAKQELRDPS LLDVGGSGPQ VTDNKRHRPE 240 HDIQPHHQLG GYMLQPTAGM VPGTHSQIPA NFWMVANPNN QGISGEPIWT FPSVGNTTMY 300 RGTMSSGLHF MNFPAPMALL PSQQLGGTGA LAVAVKGIWA CLQRLMLIVQ ASLRSHPRWH 360 WDPTIHLMGM IAMTQLVNPR INPVCVCVCV CF

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDGENGMRRP NFPLQLLERK EEDTCSSSGY PSLAITTVTT GLGSNSGLEI AELPKKPPPK  60
RASTKDRHTK VDGRGRRIRM PAACAARVFQ LTRELGHKSD GETIEWLLQQ AEPSVIAATG  120
TGTIPANFTS LNISLRSSGS SMSAPLRSSY FNHTLGAAPQ LRMASDWERG VDESTQRRIL  180
FPSIGLSSDQ NTSTLFNGNF HSNSAINQTL QAKQELRDPS LLDVGGSGPQ VTDNKRHRPE  240
HDIQPHHQLG GYMLQPTAGM VPGTHSQIPA NFWMVANPNN QGISGEPIWT FPSVGNTTMY  300
RGTMSSGLHF MNFPAPMALL PSQQLGGTGA LAVAVKGIWA CLQRLMLIVQ ASLRSHPRWH  360
WDPTIHLMGM IAMTQLVNPR INPVCVCVCV CF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	7e-50	TCP family protein