PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92902.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 300aa MW: 34428.4 Da PI: 6.5743

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.9	9.6e-33	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a+e+LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+ RWR92902.1 19 PRLRWTPDLHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	47.2	5e-15	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a+++lGg t+k++ + m g+t ++ks++q+y+ RWR92902.1 20 RLRWTPDLHHCFVHAIERLGGQdkaTPKLVLQLMDvRGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MSSYGRNGAV RQYIRSKVPR LRWTPDLHHC FVHAIERLGG QDKATPKLVL QLMDVRGLTI 60 SHVKSHLQMY RSMKNDISKP DLQSPQQRQV SSHDHDDAID EEIDTSSKPT HEFQPQYIMH 120 HPLFPKKSRI ETNFVSHALH CSQRICERVA NPYSFNDYTQ AASAENNGII KEGCFRLQED 180 AGATGIVADD LYELKALEYT VKESEFFKMN KFEEDDQFVS SRKRKSEEDL LFPMFQRKSA 240 SDEEGIEGGE RVSDLSLSLS LHPVQKSYYT SSTSENSELL TSSSRRNLKE CLGYSEEKQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	221	226	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	3e-33	G2-like family protein