PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92269.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 337aa    MW: 38773.7 Da    PI: 5.0004
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.95.4e-5581371129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++  ++   e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk++++ k
  RWR92269.1   8 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQEqcRIGYeEQSEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAIYD-K 104
                 69****************************.9***************953433332566**************************************.9 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                  +l+g++ktLvfykgrap+g+k+dW+mheyrle
  RWR92269.1 105 MRLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137
                 99*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
METMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLQEQCRIG  60
YEEQSEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA IYDKMRLIGM RKTLVFYKGR  120
APNGQKSDWI MHEYRLESEE NGPPQEEGWV VCRAFKKRIS SQTRTSEGWD SSYGYEELSG  180
LSSIVDSVEY LRRQAPMFMC KQEIEADNLN LLQHSEQFVQ QLPQLESPPL PLLKRPRMVS  240
IGSAENEEED QTTRGCSSSS NIEKVTDWRA LDKFVASQLS QGEGYDDGGR MSNLGVQHNM  300
DMALLLLQSR SREEGSMING CLSSGPDCDI GLCIFEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-140NAC family protein