PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91971.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 600aa MW: 66713.9 Da PI: 4.3039

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.5	6.4e-50	13	141	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l pGfrFhPtdeelv+++Lk+kv +kk++l +vi+e+diyk+ePwdLp + +k+++ w+fFs+ dkky + +r+nr+t++gyW++tgkd+++ + + RWR91971.1 13 LSPGFRFHPTDEELVCYFLKRKVCNKKFQL-DVIAEIDIYKFEPWDLPglSLLKTRDLVWFFFSTLDKKYGSVSRTNRITQQGYWRTTGKDRPIQR-NV 109 579*************************.9************6336777888********************************99.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 ++vg+k+tLvfy gr+p+ge+t+Wvmheyrle RWR91971.1 110 RTVGMKRTLVFYIGRTPHGERTNWVMHEYRLE 141 9***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MSEATVTSPV TNLSPGFRFH PTDEELVCYF LKRKVCNKKF QLDVIAEIDI YKFEPWDLPG 60 LSLLKTRDLV WFFFSTLDKK YGSVSRTNRI TQQGYWRTTG KDRPIQRNVR TVGMKRTLVF 120 YIGRTPHGER TNWVMHEYRL EDSGLVGAGV LQDAYVVCKV FEKSGSGPKN GEQYGAPFIE 180 EEWDDDILSP QGETGNEDSF DAGEPSYFLP INHELTPEMS VTYGNVAPVM GFNWPDSGNS 240 TVGLLEGVHA QRLLDGMDED PNQMELHDNQ QLFSNMGENT ILLEEHGDQD FFDSMDKPIY 300 SPEVSLIYSQ FNDENHLEMD DAANDKEVDC SSGEGVNGHL KYNDSSTAFE NGFFLEVNDL 360 LNPIKADSSG LDVDELLMHF PATDNNLDYE ALGSCEQLNE DAYTSDQANL AVEAEGVIAE 420 SNPPCQQATE APDSEGASSS GHKLVPSGGS RDENNNFKAT NVATGSDVKN EGDSNKSLWF 480 SSLLESIPSP PASAAEYSLN GSVESIKQNS ANTSSSIHVN AEAFFMSKLM VTDSTKHWLV 540 KKGDVRFLLS YGMRRGDLEP LAEIPSKATS AMLRNGFCVC FWFLILAASF KIGSYFYARY

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MSEATVTSPV TNLSPGFRFH PTDEELVCYF LKRKVCNKKF QLDVIAEIDI YKFEPWDLPG  60
LSLLKTRDLV WFFFSTLDKK YGSVSRTNRI TQQGYWRTTG KDRPIQRNVR TVGMKRTLVF  120
YIGRTPHGER TNWVMHEYRL EDSGLVGAGV LQDAYVVCKV FEKSGSGPKN GEQYGAPFIE  180
EEWDDDILSP QGETGNEDSF DAGEPSYFLP INHELTPEMS VTYGNVAPVM GFNWPDSGNS  240
TVGLLEGVHA QRLLDGMDED PNQMELHDNQ QLFSNMGENT ILLEEHGDQD FFDSMDKPIY  300
SPEVSLIYSQ FNDENHLEMD DAANDKEVDC SSGEGVNGHL KYNDSSTAFE NGFFLEVNDL  360
LNPIKADSSG LDVDELLMHF PATDNNLDYE ALGSCEQLNE DAYTSDQANL AVEAEGVIAE  420
SNPPCQQATE APDSEGASSS GHKLVPSGGS RDENNNFKAT NVATGSDVKN EGDSNKSLWF  480
SSLLESIPSP PASAAEYSLN GSVESIKQNS ANTSSSIHVN AEAFFMSKLM VTDSTKHWLV  540
KKGDVRFLLS YGMRRGDLEP LAEIPSKATS AMLRNGFCVC FWFLILAASF KIGSYFYARY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-90	NAC family protein