PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR91580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 213aa MW: 24646.2 Da PI: 6.4026 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 60.7 | 2.2e-19 | 15 | 72 | 29 | 71 |
E2F_TDP 29 evakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +va+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg RWR91580.1 15 KVADELVAEfadpsnrvespdrqqlDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 72 79***********************************************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MKGLRTLNDH ELNTKVADEL VAEFADPSNR VESPDRQQLD EKNIRRRVYD ALNVLMAMDI 60 ISKDKKEIQW KGLPRTSLND IEELKSECIG LRHRLEKKAA YLQELEDQVS KTWYNGMSSC 120 MAQEMLLLGE WLYLLFWFST PFELHDDAYV LKSMRLCGRQ NEEGTHDPIV ERVESSSMLS 180 VYQHHIPRAS AIRGQPASPP IPGILKARIK HEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.2 | 2e-52 | E2F/DP family protein |