PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91137.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 317aa MW: 35284 Da PI: 8.4727

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.4	8.3e-30	158	217	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a Cpvkkkv+rsaed ++++ tYegeHnh+ RWR91137.1 158 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApACPVKKKVQRSAEDRSILVATYEGEHNHQ 217 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MDLPWVSAPI CLDLNMEFLP ASKDNVEESL QSNSVDIGMK ISAKDEKAVL KAELNRVARE 60 NQKLNKMLNE MKENFYNLQN QVIDLVNQAP DKEPAQSRKR KEEDRDDTKP SNGKGDCSNH 120 VESSSSEEDS GKKQCKLPKT KISKLCVRTD PSDSSMVVKD GYQWRKYGQK VTRDNPCPRA 180 YFKCSFAPAC PVKKKVQRSA EDRSILVATY EGEHNHQSPS QADVPNGPSH CGPIASAPCS 240 VSTRSMGPTI TLDMIQPMLG PTKEVEKPPQ RDVQSPEFRR FLVEKMAASL SKDPAFTEAL 300 ATAISGNIIR SSPGRRW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	136	RKRKEEDRDDTKPSNGKGDCSNHVESSSSEEDSGKKQCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	2e-71	WRKY family protein