PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90606.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 267aa MW: 30984 Da PI: 5.1502

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.7	2.5e-45	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+++yLk ++gk+l+ vi ++++y+++Pw+Lp ++ +e+ewyf ++rd+k+++g r+nr+t++g+Wkatg+d+++ s +++ RWR90606.1 11 PGFRFHPTEEELLDFYLKGALHGKNLSS-GVIGTLNLYRHDPWELPGLATIGEREWYFLVPRDRKHSNGGRPNRTTENGFWKATGSDRSIRSMkdPKRV 108 9**********************999.99***********8777899*********************************998666778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +gl+ktLvfykgrap+g +tdWvm+eyr+ RWR90606.1 109 IGLRKTLVFYKGRAPRGCRTDWVMNEYRM 137 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MEKSTSELEL PGFRFHPTEE ELLDFYLKGA LHGKNLSSGV IGTLNLYRHD PWELPGLATI 60 GEREWYFLVP RDRKHSNGGR PNRTTENGFW KATGSDRSIR SMKDPKRVIG LRKTLVFYKG 120 RAPRGCRTDW VMNEYRMPDT CPIPKEDIVL CKIYRKATSL KVLEQRAAME EDTRMSQIST 180 SATDSASSPE EESWEMTMPL IDEVLEENKI EIERESENSS AQLEDSAKES LPQLQLPKYN 240 LEWMQDPFLL RSPWLENWTT YSNLLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-101	NAC family protein