PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89974.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 283aa    MW: 30401.5 Da    PI: 6.7483
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89974.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.94.4e-3264118358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  ++rY+eClkNhA+ +GghavDGCgEfmp+ geeg+ +alkCaAC CHRnFHR+ ++
   RWR89974.1  64 TTRYRECLKNHAVGIGGHAVDGCGEFMPA-GEEGSLDALKCAACSCHRNFHRKVTD 118
                  689*************************9.999********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MELEEDHEGQ EEEEEEEEEE EMGLPSSASY DALGNSARAK IIASTGQGIS SVAAAAAASH  60
RKLTTRYREC LKNHAVGIGG HAVDGCGEFM PAGEEGSLDA LKCAACSCHR NFHRKVTDGG  120
GGGGGRGGGE GFHLLHHQPY HPHVSPYYRT PYLHVPRPLA LPSTSGGGAQ SRGDDQDDVS  180
NNPSPSGGTV TAAKKRFRTK FTADQKEKML ALADRVGWRI QKQDEPAVQQ FCRDTGVKRH  240
VLKVWMHNNK NTLGKKPNPS PSPSPNPDPN PNPNPNPDPN PPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.18e-70ZF-HD family protein