PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89795.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

SBP

Protein Properties

Length: 311aa MW: 34767.2 Da PI: 8.506

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.6	2.4e-40	151	228	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adl +ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l+efD++krsCrrrLa+hn+rrrk+q+ RWR89795.1 151 RCQAEGCAADLIHAKHYHRRHKVCEFHSKASTVVANGLTQRFCQQCSRFHLLTEFDQGKRSCRRRLADHNRRRRKSQS 228 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MLEYGWGNPA SIFLSEEEEA SQENDQSRQM FDPFNQTLTG NLFSPVAAFP SHHHHNQFQH 60 QQQNQALFDS HPRPEISSSS PAQAPVGFSQ NPAFQLASPK NVGFSGNIGG DFPARIGLNL 120 GVRTYFSSAD DDFVNRLYRR SRPIESANTP RCQAEGCAAD LIHAKHYHRR HKVCEFHSKA 180 STVVANGLTQ RFCQQCSRFH LLTEFDQGKR SCRRRLADHN RRRRKSQSQP QFESSTRVSL 240 HPEERSSPES GTPSSSSVSV AVSPPRIALD CFSSKYGGSV QASSSSSSSR ISRSKENFML 300 FEPRAMDEEG Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	2e-56	SBP family protein