PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89691.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family HSF
Protein Properties Length: 180aa    MW: 19638.7 Da    PI: 6.764
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind29.81.5e-091753238
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHH CS
  HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefak 38
                  Fl k+y++++d++++ +++ws+++nsfvv d+ ef +
    RWR89691.1 17 FLIKTYDMVDDPSTNAIVQWSHTSNSFVVRDPAEFGR 53
                  9*********************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MDGGSNIVSI SNAPPPFLIK TYDMVDDPST NAIVQWSHTS NSFVVRDPAE FGRVFSPGVH  60
GKWDSIEKKV ILKSIDCVKC LTIVSVNSSP LMKKSMVGAI QVLLVSAVLE PLTPSQADVV  120
IPELPQVHGM VPESNVADIP NENFAIPEVV GNGFISPRCP VQEWMRRCQW KKGNSRVTPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17750.11e-14HSF family protein