PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89637.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

VOZ

Protein Properties

Length: 490aa MW: 54560 Da PI: 5.9256

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	442	7.2e-136	215	431	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rpaqgsew+qdycssfha+la+neg+pg+tpvlrp+gidlkdg+lfaal+ak+qgk+vgipecegaat+kspwna+elf+ s RWR89637.1 215 PPPSAFLGPKCALWDCPRPAQGSEWCQDYCSSFHANLAVNEGPPGMTPVLRPGGIDLKDGPLFAALTAKTQGKDVGIPECEGAATTKSPWNAPELFNRS 313 89*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdy grgwhesrkqvmkefgglkrsyymdpqp+++fewhlyeyei+++d +alyrlelklvd+kks+kg RWR89637.1 314 FLEGETIREWLFFDKPRRAFESGNRKQRSLPDYCGRGWHESRKQVMKEFGGLKRSYYMDPQPQNHFEWHLYEYEITNCDVCALYRLELKLVDGKKSPKG 412 *********************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 +v++dsl+dlq+++grl+a RWR89637.1 413 RVNNDSLVDLQQQMGRLSA 431 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MGKGSKIGCK MASHQLFKDK AKNRVDDLQG MFTDLQFARK ESRSTDVAVL EEQVHQMLRE 60 WKAELNEASP ASSLPGNNSL ASSNLSSDIR RLLQLCEEED DATSALVAPT NPKPEPDDVH 120 GGLQADNTVF QEGYYANQAS QGHDYQEEYH GKGVPSIGLH PTVLNNLEAM TQLDYHQFDM 180 YHDFPSSIFL GFNGTGQCGE DGISHISSLL PRVCPPPSAF LGPKCALWDC PRPAQGSEWC 240 QDYCSSFHAN LAVNEGPPGM TPVLRPGGID LKDGPLFAAL TAKTQGKDVG IPECEGAATT 300 KSPWNAPELF NRSFLEGETI REWLFFDKPR RAFESGNRKQ RSLPDYCGRG WHESRKQVMK 360 EFGGLKRSYY MDPQPQNHFE WHLYEYEITN CDVCALYRLE LKLVDGKKSP KGRVNNDSLV 420 DLQQQMGRLS AEFPADNKRS VKGRMRTSLK ETADTNYPST IQIPAMNGGV GYYGVGRNSF 480 VESLNGYYGT

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MGKGSKIGCK MASHQLFKDK AKNRVDDLQG MFTDLQFARK ESRSTDVAVL EEQVHQMLRE  60
WKAELNEASP ASSLPGNNSL ASSNLSSDIR RLLQLCEEED DATSALVAPT NPKPEPDDVH  120
GGLQADNTVF QEGYYANQAS QGHDYQEEYH GKGVPSIGLH PTVLNNLEAM TQLDYHQFDM  180
YHDFPSSIFL GFNGTGQCGE DGISHISSLL PRVCPPPSAF LGPKCALWDC PRPAQGSEWC  240
QDYCSSFHAN LAVNEGPPGM TPVLRPGGID LKDGPLFAAL TAKTQGKDVG IPECEGAATT  300
KSPWNAPELF NRSFLEGETI REWLFFDKPR RAFESGNRKQ RSLPDYCGRG WHESRKQVMK  360
EFGGLKRSYY MDPQPQNHFE WHLYEYEITN CDVCALYRLE LKLVDGKKSP KGRVNNDSLV  420
DLQQQMGRLS AEFPADNKRS VKGRMRTSLK ETADTNYPST IQIPAMNGGV GYYGVGRNSF  480
VESLNGYYGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein