PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 167aa MW: 19319.4 Da PI: 9.2625 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56 | 6.7e-18 | 16 | 69 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ ++++eql Le+ F+ +++++ e++ +LA+ lgL+ rqV +W+qN+Ra++k RWR89611.1 16 NKKRLSQEQLMLLESSFNLEKKLQPERKIQLARDLGLQPRQVAIWYQNKRARWK 69 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 111.4 | 6.1e-36 | 16 | 107 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rls+eq+ lLE+sF+ e+kL+perK +lar+Lglqprqva+W+qn+RAR+kt+ lE dy+a+ +++d++ +e+++Lekeve+L+ el++ RWR89611.1 16 NKKRLSQEQLMLLESSFNLEKKLQPERKIQLARDLGLQPRQVAIWYQNKRARWKTQTLECDYKAICSRLDRVLAEKKSLEKEVEKLKGELAK 107 79*************************************************************************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MSLIQKPPPK HQTKHNKKRL SQEQLMLLES SFNLEKKLQP ERKIQLARDL GLQPRQVAIW 60 YQNKRARWKT QTLECDYKAI CSRLDRVLAE KKSLEKEVEK LKGELAKAHE MLRSNILPFS 120 SFSPPSEEEM SSTLHGEVNC CEEKLGVQVE ELYACLMGSG RQLGELK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22430.1 | 5e-20 | HD-ZIP family protein |