PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89601.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 417aa MW: 45791.3 Da PI: 5.9581

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.2	1.6e-27	147	201	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++Wtp+LH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ RWR89601.1 147 KVKVDWTPDLHRRFVQAVEQL-GLDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 201 5689***************.******************************86 PP
2	Myb_DNA-binding	38	3.9e-12	150	199	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT++++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ RWR89601.1 150 VDWTPDLHRRFVQAVEQLGLDkaVPSRILELMGiDCLTRHNIASHLQKYR 199 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MLSVSPLTIP SNEREGEIST LGADEFSDGC SIGNLLDDID LGDLFVGIDN GDVLPDLELD 60 PELLAEFSVE GSDLNVSPGP KETEREEQRQ EGEKGSSQRE ALVDQREESS TTENSATTQK 120 NSVSSEGYRG QKSSTTTQAK GTQGKKKVKV DWTPDLHRRF VQAVEQLGLD KAVPSRILEL 180 MGIDCLTRHN IASHLQKYRS HRKHLMAREA EAANWNQRRQ IHTGAGSKSS MSPWLAPTMG 240 FPPHAAMQPY RPLHVWGHPT VNQSSSHLWP RHLIPSPITP PQPPWAASPP PPDPTYWQSP 300 HPRVSRDGWA PNPLTQGTPC FPRPMITPSL SSPPVPGFPP HALYNRTDNS TFIPSAHLDS 360 HLPFDFHPSE ETIDAAIGDV LAKPMLSLPL GLKPPSLESV MVELQRQGVS KIPPSSD

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MLSVSPLTIP SNEREGEIST LGADEFSDGC SIGNLLDDID LGDLFVGIDN GDVLPDLELD  60
PELLAEFSVE GSDLNVSPGP KETEREEQRQ EGEKGSSQRE ALVDQREESS TTENSATTQK  120
NSVSSEGYRG QKSSTTTQAK GTQGKKKVKV DWTPDLHRRF VQAVEQLGLD KAVPSRILEL  180
MGIDCLTRHN IASHLQKYRS HRKHLMAREA EAANWNQRRQ IHTGAGSKSS MSPWLAPTMG  240
FPPHAAMQPY RPLHVWGHPT VNQSSSHLWP RHLIPSPITP PQPPWAASPP PPDPTYWQSP  300
HPRVSRDGWA PNPLTQGTPC FPRPMITPSL SSPPVPGFPP HALYNRTDNS TFIPSAHLDS  360
HLPFDFHPSE ETIDAAIGDV LAKPMLSLPL GLKPPSLESV MVELQRQGVS KIPPSSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	6e-64	G2-like family protein