PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89575.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GRF

Protein Properties

Length: 556aa MW: 60131 Da PI: 6.6893

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.7	2.8e-25	152	195	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e RWR89575.1 152 DPEPGRCRRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKPVE 195 79***************************************998 PP
2	QLQ	48.9	2e-17	85	119	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT +Q+q+L +Q+l+yKy++ ++PvP eLl +i+ RWR89575.1 85 PFTSSQWQELQRQALIYKYMVCSMPVPTELLIPIC 119 8*********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MGERVGEGLG LGLVPQKLAR TETFPFRMMH PLACSSVGPT FYSGSDLYDV AGTAASAGAR 60 TLPLQPFQTA IRSPGVGMAA SMGFPFTSSQ WQELQRQALI YKYMVCSMPV PTELLIPICS 120 SRNLTDPSTA VASPSNVGRT ACFNLRFSSS IDPEPGRCRR TDGKKWRCSR DVAPDQKYCE 180 RHMHRGRPRS RKPVEVPAQN QPRPTETPAP TNPDTIVALS NLSTPVAPSF LHQHHHQHQT 240 PGYFRNPDSN FPSPSLVSTS RVTEKEHRYL DPMAANHPWQ LMHANVGMRS SSCGESNAPE 300 SNAPVLQPYD DHLRLNYTDF GSIGVETEPN DQCSLYLNNN FTSLEGPDSN RRQPSRGFID 360 AWSIASRENQ TTPGTTTASE LNNNGSIKSP VLRDKNLPFS SLTLSIPSCD GTTLEDMDQI 420 EMGLGVNDSE RDEIGSLKQQ PSSWINPIPW LSSTPLGGPL GEVLQSSAAA GSNSASPQAC 480 NSSKSPCEGG LNLLTDGWGD VGSTLERPPR LDSSPSGVLH RTLVSPSDSS SSSSPTFTAA 540 KSEIALQWLC NSKSSS

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MGERVGEGLG LGLVPQKLAR TETFPFRMMH PLACSSVGPT FYSGSDLYDV AGTAASAGAR  60
TLPLQPFQTA IRSPGVGMAA SMGFPFTSSQ WQELQRQALI YKYMVCSMPV PTELLIPICS  120
SRNLTDPSTA VASPSNVGRT ACFNLRFSSS IDPEPGRCRR TDGKKWRCSR DVAPDQKYCE  180
RHMHRGRPRS RKPVEVPAQN QPRPTETPAP TNPDTIVALS NLSTPVAPSF LHQHHHQHQT  240
PGYFRNPDSN FPSPSLVSTS RVTEKEHRYL DPMAANHPWQ LMHANVGMRS SSCGESNAPE  300
SNAPVLQPYD DHLRLNYTDF GSIGVETEPN DQCSLYLNNN FTSLEGPDSN RRQPSRGFID  360
AWSIASRENQ TTPGTTTASE LNNNGSIKSP VLRDKNLPFS SLTLSIPSCD GTTLEDMDQI  420
EMGLGVNDSE RDEIGSLKQQ PSSWINPIPW LSSTPLGGPL GEVLQSSAAA GSNSASPQAC  480
NSSKSPCEGG LNLLTDGWGD VGSTLERPPR LDSSPSGVLH RTLVSPSDSS SSSSPTFTAA  540
KSEIALQWLC NSKSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	6e-38	GRF family protein