PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89433.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27568.5 Da PI: 9.6949 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.9 | 2e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELS+LCdaeva+i+fss+gklye+ RWR89433.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSILCDAEVALIVFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 106.8 | 2.5e-35 | 77 | 171 | 5 | 99 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ + ++++++ ++qe++kLk+++e+Lqr+qRhllGedL++Ls+keLqqLe+qLe +l+k R++K+++++eq+eel+kke++l ++nk+L++kle RWR89433.1 77 QDANISDRETQGWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSVKELQQLERQLEVALSKARQRKTQIMMEQMEELRKKERQLGDINKQLKNKLE 171 55668999************************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSILCD AEVALIVFSS RGKLYEFGSV 60 GTNKTLERYQ RCCYNPQDAN ISDRETQGWY QEVSKLKAKY ESLQRSQRHL LGEDLGPLSV 120 KELQQLERQL EVALSKARQR KTQIMMEQME ELRKKERQLG DINKQLKNKL ETEGAFRGLQ 180 GSWESGAVVG NNTFSLHPSQ SGPMDCEPTL QIGYHPHFVP PEAAIPRTIA GESNFIQGWV 240 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-109 | MIKC_MADS family protein |