PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89405.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 358aa    MW: 40634.4 Da    PI: 9.9955
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.61.9e-31292349359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p++++itYegeHnh+
  RWR89405.1 292 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIITYEGEHNHS 349
                 9************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEEVEETNKA AVECGHRVLS LLSQPQHQVQ YRNLMFETGH AVLKFQKVVS LLNTSLGHGR  60
ARIVKNIQSP FSQNSFLDNT ISRTDSSTKS LQVLKRTCGE NPIKEMDLTA KNRIQLPSRE  120
NPTLEMDSSS SAAKNHFQLS SQMQTMHMQF LQQQQQMKLQ ADMLHRRSNS GLNLKFDSSS  180
CTPTASSNRS FISSLSMDGS VANGSLHQPS KRRCSGGEDG SGKCGTSGRC HCSKRRLDFT  240
NFAFNLFCFC WVSNLIELKF DFFFLWAQRK LRVKRSIKVP AISNKLADIP PDEYSWRKYG  300
QKPIKGSPHP RGYYKCSSMR GCPARKHVER CLEEPSMLII TYEGEHNHSR LLPQIAYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.15e-87WRKY family protein