PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89201.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 281aa    MW: 30952.8 Da    PI: 5.2307
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.54.2e-2674124251
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEE CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveit 51 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++it
  RWR89201.1  74 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTMLVIT 124
                 69*************************998*****************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDGRFNNLHH HHHNPFMLDQ EEPINPQEKP RLPNGKMSDS SPHKKRRSIQ KRVVSIPVGD  60
PDGSRTKGEG PPPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRADPTM  120
LVITLVIGLS SSAVGISIGD RIILERCGNL GLGIGIQIQI LNFHVFPNSY FGDVTPPAVE  180
QDDDKSAAVE TDAALLAEEF CWFADVASSP AVDSVFESPI CTGEDDVEAM VFTMREEDES  240
LFADLGELPE CSVVFRRRFF GEDEEGGRCS IRPASLCGSI G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.16e-55WRKY family protein