PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89042.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 594aa MW: 63862.5 Da PI: 5.8019

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.2e-30	347	405	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ RWR89042.1 347 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 405 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MDKGGGLSID SDSIGFFLTK PNSFLASSGI HTKRKRDPMD SNHRFYLNCK DDDSGAASVD 60 EGRNEKRVDE MDFFSDKTTR LQESDGKSSS LNNIIKKEEL NETATRLDFD VNTGLRLLTA 120 NTGSDQSTID DGLSPHADDK QEKSELMTLQ AELDRINEEN QRLTGLLSQV SHNYNALQMH 180 LVSLMQQQNN KNQSPGENET ADHDMDEKKH DLGGGGGGGG GDGGGFIVPR QFMDLGPAAT 240 AETDEPSQSS SEGRSRDRAG SPHNNAEVVS KNNINSREIV PLDHDKTDLG DGRVRREESP 300 DQSSQGWVPN KLPKLPTSKN VDQSSSEATM RKARVSVRAR SEAPMITDGC QWRKYGQKMA 360 KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTILITTYEG NHNHPLPPAA MAMASTTSAA 420 VGMLLSGSMS SSDGLMNPNF LARTLLPCSS NMATISASAP FPTVTLDLTH SPSPLQFQRP 480 PTQFQVPFPN PPQGFGSSQT PPIPQIFGQS LYNQSKFSGL QMSPNIGSTQ FAQAQQPSLA 540 DTVNAATAAI TADPNFTAAL AAAISSIIGG ANNNTSSATT TTNSGSSNPN YPPN

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MDKGGGLSID SDSIGFFLTK PNSFLASSGI HTKRKRDPMD SNHRFYLNCK DDDSGAASVD  60
EGRNEKRVDE MDFFSDKTTR LQESDGKSSS LNNIIKKEEL NETATRLDFD VNTGLRLLTA  120
NTGSDQSTID DGLSPHADDK QEKSELMTLQ AELDRINEEN QRLTGLLSQV SHNYNALQMH  180
LVSLMQQQNN KNQSPGENET ADHDMDEKKH DLGGGGGGGG GDGGGFIVPR QFMDLGPAAT  240
AETDEPSQSS SEGRSRDRAG SPHNNAEVVS KNNINSREIV PLDHDKTDLG DGRVRREESP  300
DQSSQGWVPN KLPKLPTSKN VDQSSSEATM RKARVSVRAR SEAPMITDGC QWRKYGQKMA  360
KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTILITTYEG NHNHPLPPAA MAMASTTSAA  420
VGMLLSGSMS SSDGLMNPNF LARTLLPCSS NMATISASAP FPTVTLDLTH SPSPLQFQRP  480
PTQFQVPFPN PPQGFGSSQT PPIPQIFGQS LYNQSKFSGL QMSPNIGSTQ FAQAQQPSLA  540
DTVNAATAAI TADPNFTAAL AAAISSIIGG ANNNTSSATT TTNSGSSNPN YPPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-122	WRKY family protein