PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR88858.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 307aa    MW: 32967.2 Da    PI: 6.4094
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR88858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.5e-10156200554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P++      K + a++L + veY++ L
  RWR88858.1 156 HSIAERLRRERIAERMKALQELVPNS-----NKTDRAAMLDEIVEYVRFL 200
                 99***********************7.....5***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MANPPEGLSD DFLEQILSMP SYPGTDGNLA GTAMGLQLGS GDGSGQVGYQ GAVFPLGLSL  60
EQGKSGFSKP EDASGSGKRF REEAEGKASG KMQERDSVHL ASLFPPFGQV QTHSVRPNPP  120
QAFHSQGTPG TVAVVPHPPA IRPRVRARRG QATDPHSIAE RLRRERIAER MKALQELVPN  180
SNKTDRAAML DEIVEYVRFL RLQVKVLSMS RLGGASAVAQ LVADIPLPSV EGEASDSGSN  240
QRTWEKWSTD GTEREVAKLM EEDVGAAMQF LQSKALCIMP ISLAAAIYHT HQPDTPTPVK  300
PEPNAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-75bHLH family protein