PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR87878.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 27468.1 Da PI: 7.7013 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.5 | 3.2e-10 | 76 | 128 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ h +Er+RR+++ + + Lr++lP ++K s ++ +A +YI++L+ RWR87878.1 76 KKTVHRDVERQRRQEMSTLYMLLRSHLPLeY---LKGKKSISDHMCEAANYINHLK 128 6899*************************77...9*******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MDYVAPQNLY FQQGDDLCFQ TTHPHHNHII QGMLTNHPPM SVDSSHELLQ KGKPKKLGEP 60 ITHDAKGDES HTNKKKKTVH RDVERQRRQE MSTLYMLLRS HLPLEYLKGK KSISDHMCEA 120 ANYINHLKAK IEELTEKRDQ MRRLITSSSN SRSPQNEARP LSPDISLRAT SNGATVLIVD 180 RSGHELPLSR VIAALEEEGL NVISVSTCMN TQSVYNIECE SNGPRVDSSG LEQKLRDSIC 240 LAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 1e-29 | bHLH family protein |