PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87877.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 283aa MW: 32233.7 Da PI: 8.5917

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.2e-12	96	151	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ h ++Er+RR+++ + Lr+llP ka+++K s ++ +Av+YI++L+ RWR87877.1 96 KKNVHRIAERQRRQEMSMLYLSLRSLLPLeYLKARNGKRSIIDHMSEAVNYINHLK 151 5788***********************666********************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MESKNYASPQ NLYFQQGDDL EENFAAPQNL YFQQGDELCF QTSLPHHTHK MQDMLANQPP 60 MSVDTSHDLQ SGKSKKLGAP IFHDAEGDES HDVKRKKNVH RIAERQRRQE MSMLYLSLRS 120 LLPLEYLKAR NGKRSIIDHM SEAVNYINHL KAKIQQLTEK RDQMRRLITS SSNSGSPQNE 180 GCLLSPHISV RATLNGATVA IVGKKGHEVP LSRVIATLVE EGLNVIRVST CIKRQSIYSI 240 ECEVHTNYLL LLNYGNSMQD LNFTKVFGNF YHRVMIQESI HLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12540.1	2e-13	bHLH family protein