PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87849.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 365aa MW: 41284.5 Da PI: 6.9444

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.9	8.3e-09	129	166	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ +A+++gL+ +qV++WF N R + RWR87849.1 129 FEHflHPYPSDMDKHIMARQTGLSRSQVSNWFINARVR 166 664459******************************88 PP
2	BELL	93.4	2.1e-30	5	61	16	72
BELL 16 leeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +V++rY+qy+eq++tv+ssFeavag g+a++Y +lAlka+SrhFrcL+d i++qi RWR87849.1 5 DSQVNRRYRQYCEQMRTVVSSFEAVAGAGAANVYSRLALKAMSRHFRCLRDGIVGQI 61 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MLCVDSQVNR RYRQYCEQMR TVVSSFEAVA GAGAANVYSR LALKAMSRHF RCLRDGIVGQ 60 IQATQKAMGE KDAVALGTTK GETPRLKLLD QTLRQQKALQ QMGMMECQPW RPQRGLPERS 120 VSILRAWLFE HFLHPYPSDM DKHIMARQTG LSRSQVSNWF INARVRLWKP MVEEMYLEET 180 KEQDKKASNG AQVLQDKSSR PNPQYCSQNP NPNTNHNNQL HPIDQKPSPD ELVHDSDYLS 240 AIISNSDMRE REVGKGIQHQ QAENFDMVDL DFSSYSHAPT STVTYSNGDC AHGGFGNTVS 300 LTLGLQRIGG GISLSFSPDS QHSLFFSRQE MEECPPMQYS ILDGETQNLP YRNLMGEQLL 360 HDLAA

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MLCVDSQVNR RYRQYCEQMR TVVSSFEAVA GAGAANVYSR LALKAMSRHF RCLRDGIVGQ  60
IQATQKAMGE KDAVALGTTK GETPRLKLLD QTLRQQKALQ QMGMMECQPW RPQRGLPERS  120
VSILRAWLFE HFLHPYPSDM DKHIMARQTG LSRSQVSNWF INARVRLWKP MVEEMYLEET  180
KEQDKKASNG AQVLQDKSSR PNPQYCSQNP NPNTNHNNQL HPIDQKPSPD ELVHDSDYLS  240
AIISNSDMRE REVGKGIQHQ QAENFDMVDL DFSSYSHAPT STVTYSNGDC AHGGFGNTVS  300
LTLGLQRIGG GISLSFSPDS QHSLFFSRQE MEECPPMQYS ILDGETQNLP YRNLMGEQLL  360
HDLAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-108	TALE family protein