PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR87628.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 29876.9 Da PI: 7.8869 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed ll+++++ +G g+W++ +++ g+ R++k+c++rw +yl RWR87628.1 14 KGPWTAREDMLLAKYIQAHGEGQWRSLPKKAGLLRCGKSCRLRWMNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.8e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w++ RWR87628.1 67 RGNIGPDEEDLIIRLHTLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110 677789****************.*********.***********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGRAPCCSKV GLHKGPWTAR EDMLLAKYIQ AHGEGQWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI GPDEEDLIIR LHTLLGNRWS LIAGRLPGRT DNEIKNYWNT QLSKRIRNRG 120 ADHNHQSGVS EALDPANMKD NNYKNQENSN CKEKIERSQT QIHVPKPIRL TSFPRDFQVM 180 EARNSSDSKL VSGPAVHGGE VVKEDLIGPW PDLKDGDLLD EEIEHELRSH GHIKDGMLEK 240 LYGEYLELLN EEEGKVQLDS LC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 1e-63 | MYB family protein |