PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87583.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 777aa MW: 86062.1 Da PI: 5.923

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.4	2.1e-10	696	750	2	47
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 + WTteE+e l++av+++ ++ W++I + k+Rt+ ++k++w++ RWR87583.1 696 LLWTTEEEEVLKEAVRKFSNPgqgslPWTRIKEFGSmvfhKTRTPVDLKDKWRNI 750 66**************************97665599*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MASSLPWAWI IETLADFKPA NSHLLQGLMR SAPDFSTDSC EIAKERVSLK ILEEMMDLVP 60 SDGSDSIGIG DAPLSSGRNV EIDVSERAVD VLFKLKELIL EGGHPSAPSL MERSGLAKEN 120 SVNCLDSGRI PADSIGEYET SKRLEVSDDT ADILSLEKNL SAEVVEDGIA NFQEGVYNQI 180 SISKLVDEDR EHSLAEKVSI NDEKAQPVKL TTQPLDDSGK MPLEPLLNGV HKTLPLQQDI 240 RQSICVVETH DERSEPTETS SRSSGDRNTN VNYNLDDEMV ANEKRQFISS QNTASRNSQA 300 GTWTEQSFCI KCDEGGQLLT CSGSSCPIAV HEVCLGSPAS FEGTDFYCPF CSYTRAHAAY 360 RKAKQKIAIA RKALSSFMGR DLVHPKPQKQ LPKGAPNKQS EAADNTNCSD KIHANKQHSE 420 MIDDLRSTRV IECQQQGKAS IDLSDNNVPC REAATSLNSE RNGAPLIWEK EGTGTIVDNN 480 QHKTAIEHRH EADFATFATF CSNDNLPCKE VGTSVIIERH DVSSINVERN SVEAVKDSQC 540 IIREAEHQQQ KEPPIVHNDD SLPCREAETS LVSETHNLTN GKGDIAEMAD NHQCMNGSTK 600 QKRAETGTNN NAGSTPCIQV EDSPTTGRQT RAKRKNAVIQ QAPHPGTPAS GPNFDAEETA 660 RNQNEEDFSS IKRTKRGRAA KRYSNPLMPH LRRTKLLWTT EEEEVLKEAV RKFSNPGQGS 720 LPWTRIKEFG SMVFHKTRTP VDLKDKWRNI MIKEGSTARK KKLWFMVVKR VVDKDRG

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MASSLPWAWI IETLADFKPA NSHLLQGLMR SAPDFSTDSC EIAKERVSLK ILEEMMDLVP  60
SDGSDSIGIG DAPLSSGRNV EIDVSERAVD VLFKLKELIL EGGHPSAPSL MERSGLAKEN  120
SVNCLDSGRI PADSIGEYET SKRLEVSDDT ADILSLEKNL SAEVVEDGIA NFQEGVYNQI  180
SISKLVDEDR EHSLAEKVSI NDEKAQPVKL TTQPLDDSGK MPLEPLLNGV HKTLPLQQDI  240
RQSICVVETH DERSEPTETS SRSSGDRNTN VNYNLDDEMV ANEKRQFISS QNTASRNSQA  300
GTWTEQSFCI KCDEGGQLLT CSGSSCPIAV HEVCLGSPAS FEGTDFYCPF CSYTRAHAAY  360
RKAKQKIAIA RKALSSFMGR DLVHPKPQKQ LPKGAPNKQS EAADNTNCSD KIHANKQHSE  420
MIDDLRSTRV IECQQQGKAS IDLSDNNVPC REAATSLNSE RNGAPLIWEK EGTGTIVDNN  480
QHKTAIEHRH EADFATFATF CSNDNLPCKE VGTSVIIERH DVSSINVERN SVEAVKDSQC  540
IIREAEHQQQ KEPPIVHNDD SLPCREAETS LVSETHNLTN GKGDIAEMAD NHQCMNGSTK  600
QKRAETGTNN NAGSTPCIQV EDSPTTGRQT RAKRKNAVIQ QAPHPGTPAS GPNFDAEETA  660
RNQNEEDFSS IKRTKRGRAA KRYSNPLMPH LRRTKLLWTT EEEEVLKEAV RKFSNPGQGS  720
LPWTRIKEFG SMVFHKTRTP VDLKDKWRNI MIKEGSTARK KKLWFMVVKR VVDKDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	1e-08	MYB_related family protein