PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR87460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | GATA | ||||||||
Protein Properties | Length: 250aa MW: 27511.5 Da PI: 5.5981 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.8 | 1.4e-18 | 171 | 205 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C t kTp+WR gp g+k+LCnaCG++y++ +l RWR87460.1 171 CSHCATEKTPQWRTGPMGPKSLCNACGVRYKSGRL 205 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MLPDAEMEGA PPVYMYEHHH PSSDLLHIDD LLDFSNEEIF DTSSSDASSH RFPPPLESSL 60 PSSEVPDVTQ FRSQFEDLSI PCEDVEELEW LSNFVEESFS DLPFPAGGGD IARSSSSWAD 120 GRARGKRSRP SGANGGGGCM MEGEFSAESG KGKGGGRRKE AVSGEVGVRK CSHCATEKTP 180 QWRTGPMGPK SLCNACGVRY KSGRLVPEYR PAASPTFVLT QHSNSHRKVM ELRRQKEVLR 240 QDSFHDFKVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45050.1 | 4e-57 | GATA family protein |