PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87338.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 276aa    MW: 31183 Da    PI: 9.4908
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.74.2e-32202260159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+H+h+
  RWR87338.1 202 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHTHS 260
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MKTVIGAATA TDANVVAVAS VGGGGGGCGG DTLFVLQSKV KPKLHIQANL PTRRARRRSE  60
KEGVRRISMA MERERGGQRC YELEVSFSNP QAMHDMEFAP MGENHGLTFM APSQSSPFPL  120
PQVSVPFNNP ATFNDNHIPK PWNQNQIEGL EPRLGGEQNC TGTEANNSWW RSSSSDKSKV  180
KVRRKLREPR FCFQTRSDVD VLDDGYKWRK YGQKVVKNSL HPRSYYRCTH NNCRVKKRVE  240
RLSEDCRMVI TTYEGRHTHS PCDDSQSSEH ECFNSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181187KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.12e-56WRKY family protein