PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR86708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB_related | ||||||||
Protein Properties | Length: 332aa MW: 35904.9 Da PI: 7.9676 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.4 | 2.8e-12 | 96 | 140 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ ++ + ++lG+g+W+ I+r + Rt+ q+ s+ qky RWR86708.1 96 PWTEDEHRMFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKY 140 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYTGS SGGSNGNTPG 60 SPAENPEHGG AADGYASEDF VPGSSSSCRE RKKGVPWTED EHRMFLLGLQ KLGKGDWRGI 120 SRNFVVSRTP TQVASHAQKY FIRQTNVSRR KRRSSLFDMI TDEPVDASTV VSRDLFPMSH 180 QQPETQSSKP LPAPPALEEE CESMDSANSN DGEAVVPKPE NSQAAYPVVF PAYFSPFFPF 240 SFPYWPGYTP EAVQKGTHEV VKPTAVHSKE PINVDELVGM SKLTLGESLG DKAPSSLSLK 300 LLDGSDRQSA FHPNPATSGS SLNSGSSPIH AV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 2e-87 | MYB_related family protein |