PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86684.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 321aa MW: 35949.9 Da PI: 6.2987

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F + L H+r+H RWR86684.1 4 HTCKLCSRTFANGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	12.7	0.00038	194	216	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H RWR86684.1 194 YQCGTCKKVFRSYQALGGHRASH 216 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MEKHTCKLCS RTFANGRALG GHMRSHVIGI THVGKTQEAE EGKESSPSST SSSSEEEDEG 60 KAQALYYGLR ENPKKSFRLV DPEFSFAIDA SSVVQDRESE TESSKNPFRR RSKRHRKSKL 120 EQEQEPASSV SDTTPEEDVA LSLMMLSRDI WMRDFRKAPF EEFEEDEEEN GIEHEEEQEE 180 EEKMRFCPRG RNKYQCGTCK KVFRSYQALG GHRASHKKIK TCTPPSPAVK LQVPNSRIGA 240 GNRRIHECPF CFRVFKSGQA LGGHKRSHLS ASASASPSAP TPPKLGDNLI DLNLPAPLED 300 DDFSQVELSA VSDAEFVDPT N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-46	C2H2 family protein