PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86582.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 265aa MW: 30037.8 Da PI: 9.895

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.9	8.6e-09	83	150	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC................TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas.............kapskKlsKaeiLekAveYIksLq 55 r+++h +Er+RR+++ + ++ Lr+llP + +K s ++ +A +YIk+ q RWR86582.1 83 RKMMHRDVERQRRHEMATLYSSLRSLLPIEYlkatrpikltllsFLIMGKRSISDHMNEAANYIKHKQ 150 7899*************************777999999999998777789999999999999999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MNFIAPTFHF QQGEELCFQT PSSLQQQNQQ QQQQQQQAVQ DFFVVGPPAA IGYRQPTIKF 60 QKAQGRNMGA PITVADDHSN KKRKMMHRDV ERQRRHEMAT LYSSLRSLLP IEYLKATRPI 120 KLTLLSFLIM GKRSISDHMN EAANYIKHKQ KKIQELTEQR DGLRRVVSTS SIRRCSLKIN 180 GSFSLPSVAV RRCLDGVEVV IGKVQLLDGV PLSMVIQVLE GEGLAVISCV LTNLNVQSAY 240 TFQCEVGVFT DIYCVVILSR VFYGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	95	KRKMMHRDVERQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	8e-35	bHLH family protein