PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86509.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GRF

Protein Properties

Length: 388aa MW: 42292.3 Da PI: 8.2717

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.6	6.2e-25	163	207	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++ +++k+CErH+hrgr rsrk++e+ RWR86509.1 163 DPEPGRCRRTDGKKWRCSRDAAPDQKYCERHMHRGRPRSRKPVEA 207 79****************************************997 PP
2	QLQ	53.5	7.4e-19	103	137	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+ +L++Q+l+yK+++a++P+Pp+Ll + + RWR86509.1 103 PFTWSQWKELERQALIYKHMVASAPIPPDLLIPFS 137 9******************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MEMTLTAAPA VAGVVGERAE GDLSLGLVPQ KLARTTAYPF RMMNPFPSNS SIDPTFYNPS 60 THSRLSDFYD VAGNAAAATS LQPFCTSPFK NPGVGMGTYL KYPFTWSQWK ELERQALIYK 120 HMVASAPIPP DLLIPFSNRN FTEASSNLSR CVSFNLRFSN GSDPEPGRCR RTDGKKWRCS 180 RDAAPDQKYC ERHMHRGRPR SRKPVEARNS NAALSEASHQ SSSGFLPKPE SKLAFPSIFS 240 SPSLNKDRPS PVNPLVLQPY EEHLSLNVVD YGNGVSKTEQ NNHSSCFYLK NDFASDARAT 300 TSKENPANFS ISSLTLSIPE DDMDQTQMGG PLGEILALQS SAGAGSSSAS SPSCVLQRTF 360 ASLSDSSSSS SSTFDKAKSE IALQWLMP

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MEMTLTAAPA VAGVVGERAE GDLSLGLVPQ KLARTTAYPF RMMNPFPSNS SIDPTFYNPS  60
THSRLSDFYD VAGNAAAATS LQPFCTSPFK NPGVGMGTYL KYPFTWSQWK ELERQALIYK  120
HMVASAPIPP DLLIPFSNRN FTEASSNLSR CVSFNLRFSN GSDPEPGRCR RTDGKKWRCS  180
RDAAPDQKYC ERHMHRGRPR SRKPVEARNS NAALSEASHQ SSSGFLPKPE SKLAFPSIFS  240
SPSLNKDRPS PVNPLVLQPY EEHLSLNVVD YGNGVSKTEQ NNHSSCFYLK NDFASDARAT  300
TSKENPANFS ISSLTLSIPE DDMDQTQMGG PLGEILALQS SAGAGSSSAS SPSCVLQRTF  360
ASLSDSSSSS SSTFDKAKSE IALQWLMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	5e-38	GRF family protein