PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85774.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 423aa MW: 46127.3 Da PI: 5.311

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.6	7.9e-31	214	272	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ RWR85774.1 214 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRHDPNMLVITYTSEHNHP 272 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MCSLFWQGME NNQGDLADIV RAGGGGGGGS MSNPTIDWQF PLEPTNLPLG IEEHFDDFGD 60 PFLDMPDPLL HELDLSGSVF FNGSNSTATT GLVKMNIGED GSGGVGCGNF VAQKIVGDEM 120 KRPCNIFSRM LQISPTSAKM TISPRSNSPM VAASQRGIKS PLDTNDMIKP NSTVQISTPR 180 NPVIKRRKSQ AKQVVCNPAP AAANNRPSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS 240 SSKGCSARKQ VERSRHDPNM LVITYTSEHN HPWPTQRNAL AGSTRSQPLK NNAASKNSPS 300 THTPKLTTFK EEHKENDADN SSSAITVGGS TTSGGTVKEE MGEMEKEKLM DIVDHEYEQG 360 FDQSYRSLLL DSSHSDDFFA DLGELGPDPL NLISSEGFSA EKSDEERVDK ALDPFNLFDW 420 SGN

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MCSLFWQGME NNQGDLADIV RAGGGGGGGS MSNPTIDWQF PLEPTNLPLG IEEHFDDFGD  60
PFLDMPDPLL HELDLSGSVF FNGSNSTATT GLVKMNIGED GSGGVGCGNF VAQKIVGDEM  120
KRPCNIFSRM LQISPTSAKM TISPRSNSPM VAASQRGIKS PLDTNDMIKP NSTVQISTPR  180
NPVIKRRKSQ AKQVVCNPAP AAANNRPSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS  240
SSKGCSARKQ VERSRHDPNM LVITYTSEHN HPWPTQRNAL AGSTRSQPLK NNAASKNSPS  300
THTPKLTTFK EEHKENDADN SSSAITVGGS TTSGGTVKEE MGEMEKEKLM DIVDHEYEQG  360
FDQSYRSLLL DSSHSDDFFA DLGELGPDPL NLISSEGFSA EKSDEERVDK ALDPFNLFDW  420
SGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	6e-74	WRKY family protein