PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR85611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 211aa MW: 23729.9 Da PI: 8.3871 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.6 | 2.4e-19 | 61 | 115 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA +l+L+ rqV vWFqNrRa+ k RWR85611.1 61 RKKLRLTKEQSRSLEESFRENQTLTPKQKEALALELKLKPRQVEVWFQNRRARTK 115 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 120.1 | 1.1e-38 | 61 | 150 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq+++LEesF+e+++L+p++K++la eL+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l+een+rL++eveeLr +l RWR85611.1 61 RKKLRLTKEQSRSLEESFRENQTLTPKQKEALALELKLKPRQVEVWFQNRRARTKLKQTEVECEHLKRCFGSLTEENRRLQREVEELR-AL 150 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGTLPTSSSS NSLELTMAPP ASDGVSCMRD LDINQVPSSD ADTWAAGIID EDEDNRTGPP 60 RKKLRLTKEQ SRSLEESFRE NQTLTPKQKE ALALELKLKP RQVEVWFQNR RARTKLKQTE 120 VECEHLKRCF GSLTEENRRL QREVEELRAL KVAPPTFLSP HTCEPLPAST LTMCPRCERV 180 TTTTNPSHLA SFSSSKSPVL RPTRQPTSAA W |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 110 | 118 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 2e-58 | HD-ZIP family protein |