PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR85594.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19837.9 Da PI: 9.1617 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.1 | 4.3e-10 | 13 | 59 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + +Er+RR ++++ ++L +llP+ + + ls + L +A YIk+L RWR85594.1 13 KTVERNRRMHMKTLCFKLASLLPShY---TREALSQQDQLDQAAAYIKKL 59 789*********************55...7777***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MKSSRASSKL ERKTVERNRR MHMKTLCFKL ASLLPSHYTR EALSQQDQLD QAAAYIKKLR 60 ENIEGLKERR ALAAHIVGIN KDMSDGMMIE FRTPVIEVKD LGSTVEVVLI SGLNRNFMFC 120 DVISVLEEEG AEVVNASFSQ VANKIFHIIH SQVTSSRVGF ESERVYERLK ELVH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-28 | bHLH family protein |