PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85226.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 403aa MW: 46201.4 Da PI: 6.0012

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.8	1.5e-51	4	130	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 pGfrF+Ptdeel+++yLkkk++g++ e+ +vi+ev+iyk+ePwdLp k +++ ++ew+fFs+ kky++g+++nrat +gyWkatgk+++++s + + RWR85226.1 4 FPGFRFRPTDEELISYYLKKKINGQEREV-RVISEVNIYKFEPWDLPaKsIIQTVDHEWFFFSPLCKKYPKGSKTNRATGTGYWKATGKERSIKS-GCN 100 59**********************999.99***********5346677888**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g+k+tLvfykgrapkge+tdWvmhey + RWR85226.1 101 QIGMKRTLVFYKGRAPKGERTDWVMHEYCI 130 9*************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MESFPGFRFR PTDEELISYY LKKKINGQER EVRVISEVNI YKFEPWDLPA KSIIQTVDHE 60 WFFFSPLCKK YPKGSKTNRA TGTGYWKATG KERSIKSGCN QIGMKRTLVF YKGRAPKGER 120 TDWVMHEYCI KGNEFDGPQN SFVLCRLWNK HDSRAASRAP NNELADQRDV LPTNLPPAEV 180 GDRHQSQVHE EVKERESCGL MRNSDMESSS VECIEAEVAE TVDIQPDETC SAQFESEVNH 240 EDTEEEFIED CFTDIMDDEI VSLSGFSNVR EEKIIDPGEF SIHGNSTPPA TLGIQRQSRQ 300 HVDMSSSEAR PSQGTAHRRI KLEMKRMVHS HEIPYTGIGD SVENVLLEDT VELGKGMKRG 360 FLLWKVRYPL MFKAVAYLAL MVSLLLLLRA IWRFARLTTS IML

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MESFPGFRFR PTDEELISYY LKKKINGQER EVRVISEVNI YKFEPWDLPA KSIIQTVDHE  60
WFFFSPLCKK YPKGSKTNRA TGTGYWKATG KERSIKSGCN QIGMKRTLVF YKGRAPKGER  120
TDWVMHEYCI KGNEFDGPQN SFVLCRLWNK HDSRAASRAP NNELADQRDV LPTNLPPAEV  180
GDRHQSQVHE EVKERESCGL MRNSDMESSS VECIEAEVAE TVDIQPDETC SAQFESEVNH  240
EDTEEEFIED CFTDIMDDEI VSLSGFSNVR EEKIIDPGEF SIHGNSTPPA TLGIQRQSRQ  300
HVDMSSSEAR PSQGTAHRRI KLEMKRMVHS HEIPYTGIGD SVENVLLEDT VELGKGMKRG  360
FLLWKVRYPL MFKAVAYLAL MVSLLLLLRA IWRFARLTTS IML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	2e-64	NAC family protein