PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84253.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 665aa MW: 74170.9 Da PI: 5.068

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85.2	5.8e-27	374	434	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqKe+ g ++prsYY C+++ gC++kk+v+rs+edp+++++tY+g+H+++ RWR84253.1 374 DDGHSWRKYGQKEILGDKYPRSYYLCAHSkvnGCTAKKQVQRSKEDPSIFHVTYQGDHTCN 434 8*************************98999************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MAVEAVVALL VDKLDKLLSN EAQLLGVHGE INWIREELNQ LRRFLKDADI KQKEDEDVRD 60 WMEDIRDICF DVDDVIDILG QGQAAQGRHG FVGRLKRRIS DQITRYKVGK EIERIKLNIK 120 GISRSRESYG IRETSSTQRL QEVSRCSVPP KIEKVITTVN DQLTNEERTR DIDEGRQEAS 180 SSSRNLQAHN PVSTLPGGPE EVGLQEEINT VGQQLIEEEP RLWDGTRDIS EGKLEASSST 240 PVFLITLLGD SEDVGLQEGI NTVGQQLIQE EPGPYDGTRD IDEGRLEASS SAPCLQADRQ 300 FSTLLGKSEE VGLKEEIDTV SKQLIKEKPS PCDGTGDIDE VPKWRDGSKK RKRQPNWSDQ 360 VRVSSGPGLE GPPDDGHSWR KYGQKEILGD KYPRSYYLCA HSKVNGCTAK KQVQRSKEDP 420 SIFHVTYQGD HTCNIQSSKI TGEASLLPQP FTLHQPLLGT ASLYLEKGTM EEVQADQLDD 480 LLDDGTNDDI NTLKMIKVTI LYYVTIIANR SDISMRKNVR QLLLNTNIRR DIPAYSTNLG 540 EADNSHDEGA ATLGAHLDEE GVGIVVCEED VLVSVGWGGT SNSPSATKNP ETSLSKIPCT 600 KQKSSPRFLQ ARFRTSSSLN EGFQQISTIA ACSYQHQSRT KNYNQVLFTG TGTMKLVPSR 660 NRFRF

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MAVEAVVALL VDKLDKLLSN EAQLLGVHGE INWIREELNQ LRRFLKDADI KQKEDEDVRD  60
WMEDIRDICF DVDDVIDILG QGQAAQGRHG FVGRLKRRIS DQITRYKVGK EIERIKLNIK  120
GISRSRESYG IRETSSTQRL QEVSRCSVPP KIEKVITTVN DQLTNEERTR DIDEGRQEAS  180
SSSRNLQAHN PVSTLPGGPE EVGLQEEINT VGQQLIEEEP RLWDGTRDIS EGKLEASSST  240
PVFLITLLGD SEDVGLQEGI NTVGQQLIQE EPGPYDGTRD IDEGRLEASS SAPCLQADRQ  300
FSTLLGKSEE VGLKEEIDTV SKQLIKEKPS PCDGTGDIDE VPKWRDGSKK RKRQPNWSDQ  360
VRVSSGPGLE GPPDDGHSWR KYGQKEILGD KYPRSYYLCA HSKVNGCTAK KQVQRSKEDP  420
SIFHVTYQGD HTCNIQSSKI TGEASLLPQP FTLHQPLLGT ASLYLEKGTM EEVQADQLDD  480
LLDDGTNDDI NTLKMIKVTI LYYVTIIANR SDISMRKNVR QLLLNTNIRR DIPAYSTNLG  540
EADNSHDEGA ATLGAHLDEE GVGIVVCEED VLVSVGWGGT SNSPSATKNP ETSLSKIPCT  600
KQKSSPRFLQ ARFRTSSSLN EGFQQISTIA ACSYQHQSRT KNYNQVLFTG TGTMKLVPSR  660
NRFRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	2e-31	WRKY family protein