PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | SBP | ||||||||
Protein Properties | Length: 405aa MW: 45145.6 Da PI: 7.1247 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.7 | 6e-42 | 116 | 192 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++dl+ ak+yhr+hkvCe hsk+p+v+vsgle+rfCqqCsrfhelsefDe+krsCrrrL++hn+rrrk+q RWR84217.1 116 ICQVEGCNVDLTGAKDYHRKHKVCESHSKCPKVIVSGLERRFCQQCSRFHELSEFDEKKRSCRRRLSDHNARRRKPQ 192 5**************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MDCNPKTPSL WDLENLVLFN GKVCDTPNQL HPIEELGMDS GSSSKSSISV HETQRQVPQF 60 SFQTIEGYPK DSHKNNELKG SGEPLIGLKL GRRTYLEDFS SSLPRNSVKK SRVSCICQVE 120 GCNVDLTGAK DYHRKHKVCE SHSKCPKVIV SGLERRFCQQ CSRFHELSEF DEKKRSCRRR 180 LSDHNARRRK PQLNTISFGS ARLASSFYDG RQQMNLAFNR VPLVHTTQAN VTWEDSCEFK 240 PTLAKSSWLR TPKEGIDGYL YFPGIELPNA ISTTHHHDSD RLLSFKGAAV EVPGQGLEAS 300 MVSSNQDATP DIQRALSLLS ASAWGSSDSL DQIMLGNHAS VAQPTMHTGF QGLQLSSSEF 360 LPDDHPSAEP LVASLALHNS GSQLHEFQLF QTPFESAFLD NNLMH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 190 | KKRSCRRRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 2e-58 | SBP family protein |